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ARM Resources are not supported on older portal by design however If you would have created ASM VM then you would have seen it in newer portal.
About setting up endpoints, the ARM VMs i.e. IaaS v2 VMs does not support endpoint and instead there is a concept of PIP and NSG . You can get more details on
http://michaelsync.net/2015/09/28/where-is-the-endpoint-setting-for-vm-in-new-azure-portal
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Its possible to do so in the new portal itself. However, Its little tricky.<br /><br />1. Click on All Settings in your VM settings<br /><div>2. Then click on Network Interfaces</div><div>3. Then click on the available network Interfaces</div><div>4. Then Click on Network Security Group </div><div>5. Then Click on Available Network Security Group <br />6. Then on Inbound Security Rules</div><div>From the Inbound security rules you can add the desired ports. <br /><br />The ARM virtual Machines will not be available in Old Portal.</div>
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Please Contact MA Azure Support / MS Azure Relationship Manager for your organization to fix this.